Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 UPK3BP1-201ENST00000428678 509 ntBASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTDP1Q9Y5B0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 NEK4P2-201ENST00000580004 1012 ntBASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 MYC-208ENST00000641036 567 ntBASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTDP1Q9Y5B0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 AL671277.2-201ENST00000458060 996 ntBASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CTDP1Q9Y5B0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.91■■□□□ 1.1
CTDP1Q9Y5B0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms