Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 KRT17P3-201ENST00000420566 1262 ntBASIC17.77■□□□□ 0.44
IFT52Q9Y366 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 AC004264.1-201ENST00000608354 794 ntBASIC17.77■□□□□ 0.44
IFT52Q9Y366 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
IFT52Q9Y366 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFT52Q9Y366 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IFT52Q9Y366 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.77■□□□□ 0.43
IFT52Q9Y366 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFT52Q9Y366 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.77■□□□□ 0.43
IFT52Q9Y366 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFT52Q9Y366 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
IFT52Q9Y366 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.77■□□□□ 0.43
IFT52Q9Y366 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFT52Q9Y366 FP475955.4-201ENST00000623131 1990 ntBASIC17.77■□□□□ 0.43
IFT52Q9Y366 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 NBPF21P-201ENST00000425093 1451 ntBASIC17.76■□□□□ 0.43
IFT52Q9Y366 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFT52Q9Y366 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 AP003097.1-201ENST00000530657 1135 ntBASIC17.75■□□□□ 0.43
IFT52Q9Y366 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 AC008403.3-201ENST00000598924 454 ntBASIC17.75■□□□□ 0.43
IFT52Q9Y366 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFT52Q9Y366 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
IFT52Q9Y366 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms