Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AC133552.2-202ENST00000575694 574 ntBASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AL121906.2-201ENST00000621597 723 ntBASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 MKRN4P-201ENST00000444706 1521 ntBASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UBE2D4Q9Y2X8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AC006557.6-201ENST00000623071 864 ntBASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AC073592.3-201ENST00000625118 1834 ntBASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBE2D4Q9Y2X8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBE2D4Q9Y2X8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.21□□□□□ -0.29
UBE2D4Q9Y2X8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms