Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA7Q9UN72 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 KRASP1-201ENST00000407852 552 ntBASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA7Q9UN72 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 KRT16P5-201ENST00000455284 522 ntBASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA7Q9UN72 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 KRT18P6-201ENST00000555540 1265 ntBASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA7Q9UN72 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHA7Q9UN72 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA7Q9UN72 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA7Q9UN72 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHA7Q9UN72 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA7Q9UN72 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 BICD1-207ENST00000551848 1962 ntBASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 AC239809.2-201ENST00000415381 517 ntBASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 AL390961.4-201ENST00000623958 2535 ntBASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA7Q9UN72 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA7Q9UN72 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA7Q9UN72 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms