Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 SPDYE15P-201ENST00000424157 909 ntBASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 RCC2P3-201ENST00000418112 1537 ntBASIC21.9■■□□□ 1.1
SYNPO2Q9UMS6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYNPO2Q9UMS6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYNPO2Q9UMS6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SYNPO2Q9UMS6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 AC112907.2-201ENST00000448639 330 ntBASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 RASA4DP-201ENST00000460726 1199 ntBASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 SEC1P-202ENST00000473944 940 ntBASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SYNPO2Q9UMS6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 AL158211.5-201ENST00000623583 2518 ntBASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 PKD1P6-201ENST00000343738 4769 ntBASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 ZNF444P1-201ENST00000559497 298 ntBASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 AC083849.1-201ENST00000615227 514 ntBASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 AC112497.1-201ENST00000624824 639 ntBASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.88■■□□□ 1.09
SYNPO2Q9UMS6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 MIR564-202ENST00000385049 94 ntBASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 AC116407.4-201ENST00000623319 1061 ntBASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SYNPO2Q9UMS6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 PCED1CP-201ENST00000419887 785 ntBASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SYNPO2Q9UMS6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms