Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL445675.2-201ENST00000620291 557 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 AL590326.2-201ENST00000625139 305 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
NCKIPSDQ9NZQ3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 RN7SL850P-201ENST00000579959 291 ntBASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 DGCR10-201ENST00000609839 495 ntBASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
NCKIPSDQ9NZQ3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 AC113347.1-201ENST00000413321 391 ntBASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCKIPSDQ9NZQ3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
NCKIPSDQ9NZQ3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCKIPSDQ9NZQ3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms