Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 AC124016.1-201ENST00000609552 612 ntBASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 TSPY23P-201ENST00000440136 739 ntBASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 AC110285.5-201ENST00000611501 352 ntBASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 AC083906.6-201ENST00000641366 219 ntBASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 AL031598.1-201ENST00000561511 1773 ntBASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NEUROD4Q9HD90 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 RNF165-205ENST00000588679 2904 ntBASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 AL445675.2-201ENST00000620291 557 ntBASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.92■□□□□ 0.46
NEUROD4Q9HD90 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 RN7SL471P-201ENST00000580476 299 ntBASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.91■□□□□ 0.46
NEUROD4Q9HD90 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms