Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 UPK3BP1-201ENST00000428678 509 ntBASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1BQ9H9Y6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.59
POLR1BQ9H9Y6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
POLR1BQ9H9Y6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
POLR1BQ9H9Y6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1BQ9H9Y6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 AC120498.9-201ENST00000339021 3867 ntBASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 AC004980.1-204ENST00000429707 299 ntBASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 AC063952.2-201ENST00000498792 1227 ntBASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 FAM87A-204ENST00000613235 858 ntBASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
POLR1BQ9H9Y6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 AC005332.7-201ENST00000614046 2005 ntBASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 AC005082.1-201ENST00000413042 2259 ntBASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
POLR1BQ9H9Y6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 HMGA1P5-201ENST00000412453 271 ntBASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 YBX1P10-201ENST00000444752 975 ntBASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 AL358472.4-201ENST00000633140 710 ntBASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms