Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 AC091799.1-201ENST00000422823 811 ntBASIC18.1■□□□□ 0.49
VCX3BQ9H321 AC105265.2-201ENST00000467189 838 ntBASIC18.1■□□□□ 0.49
VCX3BQ9H321 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 AC087633.2-202ENST00000565166 1439 ntBASIC18.09■□□□□ 0.49
VCX3BQ9H321 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3BQ9H321 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
VCX3BQ9H321 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.08■□□□□ 0.49
VCX3BQ9H321 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 AL356309.3-201ENST00000624132 1934 ntBASIC18.08■□□□□ 0.49
VCX3BQ9H321 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3BQ9H321 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.08■□□□□ 0.49
VCX3BQ9H321 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.08■□□□□ 0.49
VCX3BQ9H321 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 AC046158.3-201ENST00000624947 2558 ntBASIC18.08■□□□□ 0.48
VCX3BQ9H321 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3BQ9H321 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3BQ9H321 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 CDV3P1-201ENST00000471403 739 ntBASIC18.07■□□□□ 0.48
VCX3BQ9H321 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms