Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 DRAXINP1-201ENST00000437611 948 ntBASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 KRT8P10-201ENST00000450021 1447 ntBASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 KRT18P1-202ENST00000452408 1331 ntBASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH11XQ9BZA7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 RNF126P1-202ENST00000569893 925 ntBASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 AL109659.2-201ENST00000606809 1674 ntBASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH11XQ9BZA7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.64■■□□□ 1.53
PCDH11XQ9BZA7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH11XQ9BZA7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 KRT8P7-201ENST00000533003 1432 ntBASIC24.62■■□□□ 1.53
PCDH11XQ9BZA7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 RCC2P3-201ENST00000418112 1537 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 HOXB1-202ENST00000577092 1414 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 TSPY19P-201ENST00000418461 509 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 PVRIG2P-201ENST00000435460 978 ntBASIC24.61■■□□□ 1.53
PCDH11XQ9BZA7 KRT18P23-201ENST00000435622 1283 ntBASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms