Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AC036111.1-201ENST00000533973 1582 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 COPE-203ENST00000351079 907 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 RNF152P1-201ENST00000397754 604 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SPDYE15P-201ENST00000424157 909 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AC092597.1-201ENST00000487352 616 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 CR769767.2-201ENST00000622735 460 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 MYC-208ENST00000641036 567 ntBASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
KRTAP4-3Q9BYR4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms