Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 PRKY-204ENST00000533551 1019 ntBASIC11.31□□□□□ -0.6
LIMD2Q9BT23 PNMA6B-201ENST00000538162 1200 ntBASIC11.31□□□□□ -0.6
LIMD2Q9BT23 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 GXYLT1P5-201ENST00000614548 1189 ntBASIC11.31□□□□□ -0.6
LIMD2Q9BT23 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LIMD2Q9BT23 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AC011270.2-201ENST00000624293 2550 ntBASIC11.3□□□□□ -0.6
LIMD2Q9BT23 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AC069152.1-201ENST00000438030 544 ntBASIC11.3□□□□□ -0.6
LIMD2Q9BT23 GATS-209ENST00000454084 1030 ntTSL 3 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 AP006587.1-201ENST00000534129 1502 ntBASIC11.3□□□□□ -0.6
LIMD2Q9BT23 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.3□□□□□ -0.6
LIMD2Q9BT23 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms