Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 AP000523.1-201ENST00000398242 1049 ntBASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 PCED1CP-201ENST00000419887 785 ntBASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 AC083849.1-201ENST00000615227 514 ntBASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 AL121956.5-201ENST00000625261 221 ntBASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.28■□□□□ 0.84
PAAF1Q9BRP4 KRT8P3-201ENST00000519669 1449 ntBASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PAAF1Q9BRP4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 AC005332.1-201ENST00000577698 1310 ntBASIC20.27■□□□□ 0.83
PAAF1Q9BRP4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 STARP1-201ENST00000397973 869 ntBASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AP000550.4-202ENST00000639755 178 ntBASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AC007952.6-201ENST00000573168 2673 ntBASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 AC003957.1-201ENST00000625108 2673 ntBASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.26■□□□□ 0.83
PAAF1Q9BRP4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PAAF1Q9BRP4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms