Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.61■□□□□ 0.41
TM9SF2Q99805 AC073195.1-201ENST00000607241 877 ntBASIC17.61■□□□□ 0.41
TM9SF2Q99805 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM9SF2Q99805 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM9SF2Q99805 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF2Q99805 AC116351.2-201ENST00000606540 1585 ntBASIC17.61■□□□□ 0.41
TM9SF2Q99805 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM9SF2Q99805 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.6■□□□□ 0.41
TM9SF2Q99805 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 AL353708.3-201ENST00000610272 989 ntBASIC17.6■□□□□ 0.41
TM9SF2Q99805 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF2Q99805 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF2Q99805 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.59■□□□□ 0.41
TM9SF2Q99805 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 CD177P1-201ENST00000606252 935 ntBASIC17.59■□□□□ 0.41
TM9SF2Q99805 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF2Q99805 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF2Q99805 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF2Q99805 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF2Q99805 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF2Q99805 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF2Q99805 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF2Q99805 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.58■□□□□ 0.41
TM9SF2Q99805 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF2Q99805 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF2Q99805 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF2Q99805 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF2Q99805 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF2Q99805 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF2Q99805 AL355355.2-201ENST00000442321 338 ntBASIC17.58■□□□□ 0.4
TM9SF2Q99805 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF2Q99805 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF2Q99805 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms