Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Z83836.1-201ENST00000624605 1642 ntBASIC19.79■□□□□ 0.76
CDCA3Q99618 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDCA3Q99618 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 SDHAP1-207ENST00000440850 2000 ntBASIC19.78■□□□□ 0.76
CDCA3Q99618 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 AC104390.1-201ENST00000555663 520 ntBASIC19.78■□□□□ 0.76
CDCA3Q99618 SLC25A6P4-201ENST00000586535 553 ntBASIC19.78■□□□□ 0.76
CDCA3Q99618 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.78■□□□□ 0.76
CDCA3Q99618 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.78■□□□□ 0.76
CDCA3Q99618 AL121912.1-201ENST00000603683 238 ntBASIC19.78■□□□□ 0.76
CDCA3Q99618 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDCA3Q99618 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA3Q99618 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDCA3Q99618 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA3Q99618 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDCA3Q99618 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.77■□□□□ 0.76
CDCA3Q99618 HOXB1-202ENST00000577092 1414 ntBASIC19.77■□□□□ 0.76
CDCA3Q99618 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDCA3Q99618 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.77■□□□□ 0.76
CDCA3Q99618 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.77■□□□□ 0.76
CDCA3Q99618 AC005332.3-201ENST00000589904 676 ntBASIC19.77■□□□□ 0.76
CDCA3Q99618 Z69720.1-201ENST00000601483 472 ntBASIC19.77■□□□□ 0.76
CDCA3Q99618 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.77■□□□□ 0.76
CDCA3Q99618 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
CDCA3Q99618 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 AL109659.2-201ENST00000606809 1674 ntBASIC19.77■□□□□ 0.76
CDCA3Q99618 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA3Q99618 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.77■□□□□ 0.75
CDCA3Q99618 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA3Q99618 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.76■□□□□ 0.75
CDCA3Q99618 KRT18P23-201ENST00000435622 1283 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.76■□□□□ 0.75
CDCA3Q99618 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA3Q99618 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA3Q99618 AP003733.1-201ENST00000491725 852 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.76■□□□□ 0.75
CDCA3Q99618 AL390719.2-201ENST00000606993 987 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 AC010240.3-201ENST00000607688 395 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 AL353801.3-201ENST00000609898 542 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 IGHV3-41-201ENST00000613121 348 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDCA3Q99618 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 AC073314.1-201ENST00000568729 2216 ntBASIC19.76■□□□□ 0.75
CDCA3Q99618 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA3Q99618 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA3Q99618 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA3Q99618 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA3Q99618 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDCA3Q99618 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDCA3Q99618 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA3Q99618 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA3Q99618 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.75■□□□□ 0.75
CDCA3Q99618 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDCA3Q99618 AC074051.2-201ENST00000565115 352 ntBASIC19.75■□□□□ 0.75
CDCA3Q99618 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDCA3Q99618 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA3Q99618 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA3Q99618 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms