Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CROCCP1-201ENST00000426910 5675 ntBASIC17.91■□□□□ 0.46
NR1H4Q96RI1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 AC099791.1-201ENST00000416440 715 ntBASIC17.9■□□□□ 0.46
NR1H4Q96RI1 IGHV3-19-201ENST00000521488 291 ntBASIC17.9■□□□□ 0.46
NR1H4Q96RI1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 AC133561.4-201ENST00000566112 224 ntBASIC17.9■□□□□ 0.46
NR1H4Q96RI1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H4Q96RI1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR1H4Q96RI1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 FAM21FP-204ENST00000608637 956 ntBASIC17.89■□□□□ 0.45
NR1H4Q96RI1 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.89■□□□□ 0.45
NR1H4Q96RI1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H4Q96RI1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 TSPY26P-201ENST00000476365 1326 ntBASIC17.88■□□□□ 0.45
NR1H4Q96RI1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H4Q96RI1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms