Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 AC116562.2-201ENST00000507042 360 ntBASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RPGRIP1Q96KN7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 AC120498.9-201ENST00000339021 3867 ntBASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 AC023632.3-201ENST00000521633 145 ntBASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRIP1Q96KN7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRIP1Q96KN7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRIP1Q96KN7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.89■□□□□ 0.94
RPGRIP1Q96KN7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.89■□□□□ 0.94
RPGRIP1Q96KN7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPGRIP1Q96KN7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 UPK3BP1-201ENST00000428678 509 ntBASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPGRIP1Q96KN7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPGRIP1Q96KN7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms