Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 AC034268.1-201ENST00000441047 882 ntBASIC18.7■□□□□ 0.58
SPDL1Q96EA4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.7■□□□□ 0.58
SPDL1Q96EA4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPDL1Q96EA4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 AL355472.2-201ENST00000422958 438 ntBASIC18.69■□□□□ 0.58
SPDL1Q96EA4 AC137761.2-201ENST00000561729 223 ntBASIC18.69■□□□□ 0.58
SPDL1Q96EA4 AC145350.3-201ENST00000569033 163 ntBASIC18.69■□□□□ 0.58
SPDL1Q96EA4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 PCDHA12-202ENST00000613593 2588 ntBASIC18.69■□□□□ 0.58
SPDL1Q96EA4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SPDL1Q96EA4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 AL161938.1-201ENST00000569833 2180 ntBASIC18.68■□□□□ 0.58
SPDL1Q96EA4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 DUX4L16-201ENST00000555130 1264 ntBASIC18.68■□□□□ 0.58
SPDL1Q96EA4 C2orf69P4-201ENST00000565394 541 ntBASIC18.68■□□□□ 0.58
SPDL1Q96EA4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPDL1Q96EA4 AC090164.3-201ENST00000610780 2143 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms