Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHC3Q92529 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.28■□□□□ 0.84
SHC3Q92529 NUDT16P1-203ENST00000513809 620 ntBASIC20.28■□□□□ 0.84
SHC3Q92529 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.28■□□□□ 0.84
SHC3Q92529 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.28■□□□□ 0.84
SHC3Q92529 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.28■□□□□ 0.84
SHC3Q92529 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.28■□□□□ 0.84
SHC3Q92529 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
SHC3Q92529 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.28■□□□□ 0.84
SHC3Q92529 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SHC3Q92529 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SHC3Q92529 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.27■□□□□ 0.84
SHC3Q92529 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC3Q92529 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.27■□□□□ 0.84
SHC3Q92529 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.27■□□□□ 0.84
SHC3Q92529 Z99916.2-201ENST00000604037 246 ntBASIC20.27■□□□□ 0.84
SHC3Q92529 AP001412.1-201ENST00000608405 714 ntBASIC20.27■□□□□ 0.84
SHC3Q92529 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.27■□□□□ 0.84
SHC3Q92529 TMEM191A-211ENST00000637163 1067 ntBASIC20.27■□□□□ 0.84
SHC3Q92529 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.27■□□□□ 0.84
SHC3Q92529 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.27■□□□□ 0.83
SHC3Q92529 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.27■□□□□ 0.83
SHC3Q92529 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SHC3Q92529 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.26■□□□□ 0.83
SHC3Q92529 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SHC3Q92529 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.26■□□□□ 0.83
SHC3Q92529 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.26■□□□□ 0.83
SHC3Q92529 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.26■□□□□ 0.83
SHC3Q92529 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
SHC3Q92529 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SHC3Q92529 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.26■□□□□ 0.83
SHC3Q92529 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHC3Q92529 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHC3Q92529 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.25■□□□□ 0.83
SHC3Q92529 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHC3Q92529 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
SHC3Q92529 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.25■□□□□ 0.83
SHC3Q92529 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SHC3Q92529 HEIH-201ENST00000623091 1652 ntBASIC20.25■□□□□ 0.83
SHC3Q92529 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.25■□□□□ 0.83
SHC3Q92529 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SHC3Q92529 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHC3Q92529 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC3Q92529 KRT8P32-201ENST00000512863 1461 ntBASIC20.24■□□□□ 0.83
SHC3Q92529 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 AC096733.2-201ENST00000609937 1394 ntBASIC20.24■□□□□ 0.83
SHC3Q92529 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.24■□□□□ 0.83
SHC3Q92529 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms