Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 CRB3P1-201ENST00000449338 276 ntBASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE2Q8WXH0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC092658.1-201ENST00000505836 891 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC011840.4-201ENST00000578471 627 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 BCYRN1-201ENST00000418539 200 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC017083.2-201ENST00000608069 979 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC092933.1-201ENST00000393644 945 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SYNE2Q8WXH0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms