Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 AC002472.2-201ENST00000442739 958 ntBASIC17.14■□□□□ 0.33
CHD6Q8TD26 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD6Q8TD26 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD6Q8TD26 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 MIR2861-201ENST00000636310 90 ntBASIC17.13■□□□□ 0.33
CHD6Q8TD26 AC092902.6-201ENST00000641783 218 ntBASIC17.13■□□□□ 0.33
CHD6Q8TD26 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 AC008735.5-201ENST00000623544 497 ntBASIC17.13■□□□□ 0.33
CHD6Q8TD26 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHD6Q8TD26 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD6Q8TD26 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 AP005018.1-201ENST00000525475 301 ntBASIC17.12■□□□□ 0.33
CHD6Q8TD26 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 CR383656.12-201ENST00000549567 513 ntBASIC17.12■□□□□ 0.33
CHD6Q8TD26 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
CHD6Q8TD26 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 TSEN15P1-201ENST00000423257 515 ntBASIC17.12■□□□□ 0.33
CHD6Q8TD26 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD6Q8TD26 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD6Q8TD26 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 ARSEP1-201ENST00000420443 635 ntBASIC17.11■□□□□ 0.33
CHD6Q8TD26 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.11■□□□□ 0.33
CHD6Q8TD26 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHD6Q8TD26 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 IGHV3-41-201ENST00000613121 348 ntBASIC17.1■□□□□ 0.33
CHD6Q8TD26 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD6Q8TD26 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD6Q8TD26 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms