Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 AC117500.6-201ENST00000624871 588 ntBASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNIP1Q8TAD8 AC092667.1-201ENST00000434301 2586 ntBASIC17.89■□□□□ 0.46
SNIP1Q8TAD8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNIP1Q8TAD8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.89■□□□□ 0.45
SNIP1Q8TAD8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 KRT18P31-201ENST00000506277 1292 ntBASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 TPSP2-201ENST00000561760 610 ntBASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 AC012615.1-201ENST00000565797 1299 ntBASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNIP1Q8TAD8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 SMG8-203ENST00000578922 2178 ntBASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AP000867.3-201ENST00000524675 377 ntBASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 AC139530.3-201ENST00000620344 690 ntBASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.87■□□□□ 0.45
SNIP1Q8TAD8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 HLA-F-220ENST00000434407 884 ntBASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 LINC00265-3P-201ENST00000447588 903 ntBASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.86■□□□□ 0.45
SNIP1Q8TAD8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms