Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 AP003097.1-201ENST00000530657 1135 ntBASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 AL031598.1-201ENST00000561511 1773 ntBASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 AL512353.2-201ENST00000448759 1962 ntBASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 HLA-A-209ENST00000638375 975 ntBASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.24■□□□□ 0.51
CLHC1Q8NHS4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 AC069544.1-201ENST00000609399 999 ntBASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLHC1Q8NHS4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLHC1Q8NHS4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms