Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 TUBB8P6-201ENST00000436895 1288 ntBASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 AC083906.6-201ENST00000641366 219 ntBASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS1Q8NFJ9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 GUSBP6-202ENST00000438529 1198 ntBASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BBS1Q8NFJ9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.33
BBS1Q8NFJ9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AC006970.2-201ENST00000450065 779 ntBASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 PNMA6B-201ENST00000538162 1200 ntBASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AL137784.2-201ENST00000607332 1000 ntBASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 HLA-B-256ENST00000639848 1089 ntBASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS1Q8NFJ9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.07■□□□□ 0.32
BBS1Q8NFJ9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms