Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 MIR4785-201ENST00000585005 73 ntBASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AP000692.2-201ENST00000608391 879 ntBASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 KRT8P11-201ENST00000409686 1436 ntBASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 AC026471.5-201ENST00000615068 467 ntBASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 KRT17P2-201ENST00000300992 1314 ntBASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRFBP1Q8NEF9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFBP1Q8NEF9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 CKBP1-201ENST00000565489 1086 ntBASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFBP1Q8NEF9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms