Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
SLC17A8Q8NDX2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 SLC25A1P4-201ENST00000567977 778 ntBASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 MIR3652-201ENST00000579335 131 ntBASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC17A8Q8NDX2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 COX11P1-201ENST00000489116 835 ntBASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 AL160286.2-201ENST00000567150 934 ntBASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 FAM87A-204ENST00000613235 858 ntBASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 AL158211.5-201ENST00000623583 2518 ntBASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC17A8Q8NDX2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC17A8Q8NDX2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC17A8Q8NDX2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SLC17A8Q8NDX2 AC104417.2-201ENST00000562989 1793 ntBASIC21.33■■□□□ 1
SLC17A8Q8NDX2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC17A8Q8NDX2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 MESTP1-201ENST00000404287 994 ntBASIC21.32■■□□□ 1
SLC17A8Q8NDX2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AL355385.1-201ENST00000606123 409 ntBASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AC131212.4-201ENST00000623606 975 ntBASIC21.32■■□□□ 1
SLC17A8Q8NDX2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC17A8Q8NDX2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 KRT16P1-201ENST00000399124 1418 ntBASIC21.31■■□□□ 1
SLC17A8Q8NDX2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.31■■□□□ 1
SLC17A8Q8NDX2 AC004951.3-201ENST00000418645 1148 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms