Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 KRT8P9-201ENST00000558927 1449 ntBASIC19.5■□□□□ 0.71
RTL3Q8N8U3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL3Q8N8U3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL3Q8N8U3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 KRT8P3-201ENST00000519669 1449 ntBASIC19.48■□□□□ 0.71
RTL3Q8N8U3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.48■□□□□ 0.71
RTL3Q8N8U3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.47■□□□□ 0.71
RTL3Q8N8U3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.47■□□□□ 0.71
RTL3Q8N8U3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 SLC25A1P2-201ENST00000430693 912 ntBASIC19.46■□□□□ 0.71
RTL3Q8N8U3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.46■□□□□ 0.71
RTL3Q8N8U3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RTL3Q8N8U3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms