Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 AC018470.1-201ENST00000624790 3129 ntBASIC17.32■□□□□ 0.36
CLDN22Q8N7P3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 RNA5SP413-201ENST00000516373 109 ntBASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 AP000997.3-201ENST00000623333 2250 ntBASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN22Q8N7P3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 AC020763.4-201ENST00000623414 4170 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 TSPY21P-201ENST00000433481 731 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 UNC93B5-201ENST00000530315 699 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 AC008403.3-201ENST00000598924 454 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 AL133373.2-201ENST00000623187 2828 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN22Q8N7P3 BICD1-207ENST00000551848 1962 ntBASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 AL354751.1-201ENST00000412768 1863 ntBASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN22Q8N7P3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN22Q8N7P3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms