Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 UBE2SP1-201ENST00000450587 669 ntBASIC15.02■□□□□ -0
TTC9CQ8N5M4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TTC9CQ8N5M4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC9CQ8N5M4 CR392000.1-201ENST00000624770 1228 ntBASIC15.02■□□□□ -0
TTC9CQ8N5M4 AL031985.4-201ENST00000642138 673 ntBASIC15.02■□□□□ -0
TTC9CQ8N5M4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC9CQ8N5M4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 AL049812.1-201ENST00000432563 2267 ntBASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 AC026271.3-201ENST00000571884 352 ntBASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC9CQ8N5M4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC9CQ8N5M4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15□□□□□ -0.01
TTC9CQ8N5M4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms