Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 BX323043.1-201ENST00000641006 1765 ntBASIC20.21■□□□□ 0.83
TTC39CQ8N584 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.2■□□□□ 0.83
TTC39CQ8N584 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 AL390955.1-201ENST00000428694 934 ntBASIC20.2■□□□□ 0.82
TTC39CQ8N584 TSPY15P-201ENST00000457163 923 ntBASIC20.2■□□□□ 0.82
TTC39CQ8N584 NAPSB-206ENST00000562112 1266 ntBASIC20.2■□□□□ 0.82
TTC39CQ8N584 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC39CQ8N584 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC39CQ8N584 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 AC128688.1-201ENST00000487626 519 ntBASIC20.19■□□□□ 0.82
TTC39CQ8N584 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 AL023803.3-201ENST00000615559 522 ntBASIC20.19■□□□□ 0.82
TTC39CQ8N584 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TTC39CQ8N584 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC39CQ8N584 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TTC39CQ8N584 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC39CQ8N584 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC39CQ8N584 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 AL353719.1-201ENST00000566847 864 ntBASIC20.18■□□□□ 0.82
TTC39CQ8N584 AC010653.2-201ENST00000623505 997 ntBASIC20.18■□□□□ 0.82
TTC39CQ8N584 AC073912.3-201ENST00000624414 853 ntBASIC20.18■□□□□ 0.82
TTC39CQ8N584 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TTC39CQ8N584 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC39CQ8N584 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.17■□□□□ 0.82
TTC39CQ8N584 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TTC39CQ8N584 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC39CQ8N584 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms