Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR4674-201ENST00000582457 87 ntBASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNPOQ8N3V7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 AC092329.2-201ENST00000598402 547 ntBASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYNPOQ8N3V7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 AL121672.3-201ENST00000608644 468 ntBASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYNPOQ8N3V7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AC099778.1-201ENST00000568593 1911 ntBASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNPOQ8N3V7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms