Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 RCC2P6-201ENST00000526625 1557 ntBASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 LINC01568-207ENST00000641790 1380 ntBASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 AC008040.2-201ENST00000461049 708 ntBASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 AC092865.7-201ENST00000641832 219 ntBASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC144CPQ8IYA2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 AC005521.1-201ENST00000393351 872 ntBASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 NAPSB-206ENST00000562112 1266 ntBASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 AL445228.2-201ENST00000605589 952 ntBASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 AC010947.1-201ENST00000623454 693 ntBASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC144CPQ8IYA2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 AL049812.1-201ENST00000432563 2267 ntBASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 MESTP1-201ENST00000404287 994 ntBASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 AC091390.4-202ENST00000476426 537 ntBASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144CPQ8IYA2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 B3GAT3P1-201ENST00000471720 806 ntBASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 AC011298.2-201ENST00000617989 482 ntBASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144CPQ8IYA2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms