Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 KRT18P6-201ENST00000555540 1265 ntBASIC21.12■□□□□ 0.97
DHX40Q8IX18 MIR4758-201ENST00000577688 71 ntBASIC21.12■□□□□ 0.97
DHX40Q8IX18 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
DHX40Q8IX18 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DHX40Q8IX18 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 LTB4R2-202ENST00000528054 3092 ntBASIC21.11■□□□□ 0.97
DHX40Q8IX18 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
DHX40Q8IX18 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
DHX40Q8IX18 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 AC092118.2-201ENST00000613495 667 ntBASIC21.1■□□□□ 0.97
DHX40Q8IX18 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DHX40Q8IX18 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DHX40Q8IX18 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.09■□□□□ 0.97
DHX40Q8IX18 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 AC092368.3-202ENST00000574180 1591 ntBASIC21.09■□□□□ 0.97
DHX40Q8IX18 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.09■□□□□ 0.97
DHX40Q8IX18 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DHX40Q8IX18 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
DHX40Q8IX18 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms