Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM42Q8IWZ5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 ABALON-201ENST00000629058 1903 ntBASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 AL133373.2-201ENST00000623187 2828 ntBASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 CROCCP5-201ENST00000436658 830 ntBASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM42Q8IWZ5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 AC010980.2-201ENST00000587099 1412 ntBASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 AC006970.2-201ENST00000450065 779 ntBASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 OR10C1-204ENST00000622521 1039 ntBASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM42Q8IWZ5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 MKRN4P-201ENST00000444706 1521 ntBASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 AL390719.1-204ENST00000412397 1219 ntBASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM42Q8IWZ5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 KRT8P8-201ENST00000434750 1448 ntBASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms