Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 MIR3180-1-201ENST00000580374 94 ntBASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 MIR3180-3-201ENST00000584616 94 ntBASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 AL157888.1-201ENST00000631930 593 ntBASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 AC093525.10-201ENST00000625130 1569 ntBASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS4Q8IUM7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 AP002383.4-201ENST00000442518 975 ntBASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 KRT8P26-201ENST00000534154 1276 ntBASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 MIR3917-201ENST00000580971 93 ntBASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 AL136038.4-201ENST00000603606 1261 ntBASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.36■□□□□ 0.85
NPAS4Q8IUM7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPAS4Q8IUM7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPAS4Q8IUM7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 AC112907.3-201ENST00000577781 2400 ntBASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 MIR662-201ENST00000384847 95 ntBASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 AC111152.3-201ENST00000569699 673 ntBASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 AP002414.4-201ENST00000589764 1148 ntBASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS4Q8IUM7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.33■□□□□ 0.84
NPAS4Q8IUM7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms