Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 AL354751.1-201ENST00000412768 1863 ntBASIC17.18■□□□□ 0.34
SHFQ7M4L6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 HTR7P1-202ENST00000624664 4411 ntBASIC17.18■□□□□ 0.34
SHFQ7M4L6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 RPS2P52-201ENST00000469610 820 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 MIR4758-201ENST00000577688 71 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 AL121906.2-201ENST00000621597 723 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 AC006557.6-201ENST00000623071 864 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.17■□□□□ 0.34
SHFQ7M4L6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.17■□□□□ 0.34
SHFQ7M4L6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHFQ7M4L6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SHFQ7M4L6 AC079598.2-202ENST00000546624 1451 ntBASIC17.16■□□□□ 0.34
SHFQ7M4L6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.16■□□□□ 0.34
SHFQ7M4L6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHFQ7M4L6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 AC097658.1-201ENST00000475555 843 ntBASIC17.15■□□□□ 0.34
SHFQ7M4L6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms