Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NHLRC1Q6VVB1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 AL353807.1-201ENST00000427475 662 ntBASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 TSPY23P-201ENST00000440136 739 ntBASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 AC073195.1-201ENST00000607241 877 ntBASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NHLRC1Q6VVB1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 UBE2SP1-201ENST00000450587 669 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 AC008040.2-201ENST00000461049 708 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 AP002982.1-201ENST00000492365 877 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 AC131212.4-201ENST00000623606 975 ntBASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NHLRC1Q6VVB1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NHLRC1Q6VVB1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms