Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 AC097381.1-201ENST00000429019 1296 ntBASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 AL354811.1-201ENST00000610286 706 ntBASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 AC105233.4-201ENST00000642045 216 ntBASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM88Q6PEY1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
TMEM88Q6PEY1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 AC087623.3-201ENST00000607047 1098 ntBASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 FP475955.4-201ENST00000623131 1990 ntBASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM88Q6PEY1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 AC010141.3-201ENST00000456659 717 ntBASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 MST1L-201ENST00000442552 2185 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms