Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 LINC01521-201ENST00000504184 1943 ntBASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 GPAT2P1-201ENST00000444924 1672 ntBASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 AC083849.1-201ENST00000615227 514 ntBASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 IER3-202ENST00000376377 1350 ntBASIC21.36■■□□□ 1.01
CCDC62Q6P9F0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 AL136038.3-201ENST00000561909 1096 ntBASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 TREX1-205ENST00000625293 1783 ntBASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC62Q6P9F0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 AL023284.2-201ENST00000405850 579 ntBASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 SPDYE15P-201ENST00000424157 909 ntBASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 AC112907.2-201ENST00000448639 330 ntBASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC62Q6P9F0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC62Q6P9F0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC62Q6P9F0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC62Q6P9F0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC62Q6P9F0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.33■■□□□ 1
CCDC62Q6P9F0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC62Q6P9F0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CCDC62Q6P9F0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC62Q6P9F0 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.32■■□□□ 1
CCDC62Q6P9F0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC62Q6P9F0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.32■■□□□ 1
CCDC62Q6P9F0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.32■■□□□ 1
CCDC62Q6P9F0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms