Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MIR1238-201ENST00000408483 83 ntBASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 AC093503.3-201ENST00000624917 2352 ntBASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 AC096733.2-201ENST00000609937 1394 ntBASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 AC097488.1-201ENST00000507834 756 ntBASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC39BQ5VTQ0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 AC087499.1-201ENST00000418141 1075 ntBASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
TTC39BQ5VTQ0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 AC008040.2-201ENST00000461049 708 ntBASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 PRSS44-201ENST00000515154 1146 ntBASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 AC120498.9-201ENST00000339021 3867 ntBASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39BQ5VTQ0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
TTC39BQ5VTQ0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39BQ5VTQ0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms