Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 FEM1AP3-201ENST00000403722 1741 ntBASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39AQ5SRH9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 MIR4674-201ENST00000582457 87 ntBASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 AC116562.4-201ENST00000641316 2276 ntBASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39AQ5SRH9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39AQ5SRH9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 KRT8P45-201ENST00000414328 1447 ntBASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 FP475955.4-201ENST00000623131 1990 ntBASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 AC005332.7-201ENST00000614046 2005 ntBASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39AQ5SRH9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC39AQ5SRH9 KRT8P3-201ENST00000519669 1449 ntBASIC23.08■■□□□ 1.29
TTC39AQ5SRH9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms