Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 WIZP1-201ENST00000531444 2299 ntBASIC19.68■□□□□ 0.74
CCDC38Q502W7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 RNA5SP413-201ENST00000516373 109 ntBASIC19.68■□□□□ 0.74
CCDC38Q502W7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 AL121906.2-201ENST00000621597 723 ntBASIC19.68■□□□□ 0.74
CCDC38Q502W7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC38Q502W7 LTB4R2-202ENST00000528054 3092 ntBASIC19.68■□□□□ 0.74
CCDC38Q502W7 AC135050.7-201ENST00000624508 2218 ntBASIC19.68■□□□□ 0.74
CCDC38Q502W7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC38Q502W7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 UNC93B4-201ENST00000505679 747 ntBASIC19.67■□□□□ 0.74
CCDC38Q502W7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC38Q502W7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC38Q502W7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.66■□□□□ 0.74
CCDC38Q502W7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 UNC93B5-201ENST00000530315 699 ntBASIC19.66■□□□□ 0.74
CCDC38Q502W7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC38Q502W7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 AP006587.1-201ENST00000534129 1502 ntBASIC19.66■□□□□ 0.74
CCDC38Q502W7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC38Q502W7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.65■□□□□ 0.74
CCDC38Q502W7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC38Q502W7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC38Q502W7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms