Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 IER3-202ENST00000376377 1350 ntBASIC22.25■■□□□ 1.15
CERKLQ49MI3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 HYMAI.1-201ENST00000620949 238 ntBASIC22.24■■□□□ 1.15
CERKLQ49MI3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 AC005332.1-201ENST00000577698 1310 ntBASIC22.24■■□□□ 1.15
CERKLQ49MI3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 AC036111.1-201ENST00000533973 1582 ntBASIC22.24■■□□□ 1.15
CERKLQ49MI3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.24■■□□□ 1.15
CERKLQ49MI3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CERKLQ49MI3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 SPDYE15P-201ENST00000424157 909 ntBASIC22.23■■□□□ 1.15
CERKLQ49MI3 MCCD1P1-208ENST00000445732 328 ntBASIC22.23■■□□□ 1.15
CERKLQ49MI3 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CERKLQ49MI3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.23■■□□□ 1.15
CERKLQ49MI3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.22■■□□□ 1.15
CERKLQ49MI3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CERKLQ49MI3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CERKLQ49MI3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 AL136038.3-201ENST00000561909 1096 ntBASIC22.21■■□□□ 1.15
CERKLQ49MI3 MIR3180-5-201ENST00000583743 153 ntBASIC22.21■■□□□ 1.15
CERKLQ49MI3 AC083849.1-201ENST00000615227 514 ntBASIC22.21■■□□□ 1.15
CERKLQ49MI3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CERKLQ49MI3 AC116407.4-201ENST00000623319 1061 ntBASIC22.21■■□□□ 1.15
CERKLQ49MI3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.21■■□□□ 1.15
CERKLQ49MI3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.21■■□□□ 1.15
CERKLQ49MI3 LINC01311-201ENST00000565162 1445 ntBASIC22.21■■□□□ 1.15
CERKLQ49MI3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms