Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 HLA-G-202ENST00000376815 851 ntBASIC14.98□□□□□ -0.01
CCL20P78556 HLA-G-203ENST00000376818 1127 ntBASIC14.98□□□□□ -0.01
CCL20P78556 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL20P78556 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.98□□□□□ -0.01
CCL20P78556 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL20P78556 CCDC92B-201ENST00000575506 885 ntBASIC14.98□□□□□ -0.01
CCL20P78556 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.98□□□□□ -0.01
CCL20P78556 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL20P78556 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL20P78556 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CCL20P78556 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 AC108860.2-201ENST00000562760 2183 ntBASIC14.97□□□□□ -0.01
CCL20P78556 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 UNC93B3-201ENST00000308076 687 ntBASIC14.97□□□□□ -0.01
CCL20P78556 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.97□□□□□ -0.01
CCL20P78556 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.97□□□□□ -0.01
CCL20P78556 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCL20P78556 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 AC104187.1-201ENST00000607510 612 ntBASIC14.97□□□□□ -0.01
CCL20P78556 AC083906.6-201ENST00000641366 219 ntBASIC14.97□□□□□ -0.01
CCL20P78556 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL20P78556 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCL20P78556 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL20P78556 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL20P78556 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCL20P78556 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL20P78556 AC024257.2-201ENST00000549699 147 ntBASIC14.96□□□□□ -0.01
CCL20P78556 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CCL20P78556 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL20P78556 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.96□□□□□ -0.01
CCL20P78556 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL20P78556 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL20P78556 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL20P78556 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
CCL20P78556 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL20P78556 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL20P78556 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL20P78556 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.96□□□□□ -0.02
CCL20P78556 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL20P78556 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL20P78556 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL20P78556 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL20P78556 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCL20P78556 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCL20P78556 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL20P78556 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms