Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S1P61966 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S1P61966 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S1P61966 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
AP1S1P61966 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
AP1S1P61966 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
AP1S1P61966 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
AP1S1P61966 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
AP1S1P61966 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S1P61966 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S1P61966 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S1P61966 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.13■□□□□ 0.65
AP1S1P61966 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.13■□□□□ 0.65
AP1S1P61966 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.13■□□□□ 0.65
AP1S1P61966 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
AP1S1P61966 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
AP1S1P61966 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S1P61966 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
AP1S1P61966 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.12■□□□□ 0.65
AP1S1P61966 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S1P61966 AC007663.1-201ENST00000438948 1240 ntBASIC19.12■□□□□ 0.65
AP1S1P61966 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S1P61966 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.12■□□□□ 0.65
AP1S1P61966 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.12■□□□□ 0.65
AP1S1P61966 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S1P61966 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S1P61966 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
AP1S1P61966 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP1S1P61966 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
AP1S1P61966 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP1S1P61966 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.11■□□□□ 0.65
AP1S1P61966 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
AP1S1P61966 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP1S1P61966 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AP1S1P61966 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
AP1S1P61966 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
AP1S1P61966 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP1S1P61966 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.1■□□□□ 0.65
AP1S1P61966 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.1■□□□□ 0.65
AP1S1P61966 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.1■□□□□ 0.65
AP1S1P61966 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.1■□□□□ 0.65
AP1S1P61966 FAM87A-204ENST00000613235 858 ntBASIC19.1■□□□□ 0.65
AP1S1P61966 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms