Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.33■□□□□ 0.36
CXCR4P61073 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR4P61073 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR4P61073 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR4P61073 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CXCR4P61073 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR4P61073 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CXCR4P61073 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CXCR4P61073 LINC00896-202ENST00000609602 2128 ntBASIC17.32■□□□□ 0.36
CXCR4P61073 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CXCR4P61073 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCR4P61073 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCR4P61073 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCR4P61073 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCR4P61073 GNAS-203ENST00000306120 1878 ntBASIC17.32■□□□□ 0.36
CXCR4P61073 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXCR4P61073 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCR4P61073 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCR4P61073 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.32■□□□□ 0.36
CXCR4P61073 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR4P61073 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCR4P61073 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CXCR4P61073 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCR4P61073 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CXCR4P61073 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCR4P61073 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.31■□□□□ 0.36
CXCR4P61073 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CXCR4P61073 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CXCR4P61073 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCR4P61073 AC090340.1-201ENST00000620778 4980 ntBASIC17.31■□□□□ 0.36
CXCR4P61073 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCR4P61073 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCR4P61073 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCR4P61073 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 AC093787.1-201ENST00000450396 207 ntBASIC17.3■□□□□ 0.36
CXCR4P61073 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms