Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.28□□□□□ -0.28
CKS1BP61024 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 AC007326.2-201ENST00000624224 7579 ntBASIC13.28□□□□□ -0.28
CKS1BP61024 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.27□□□□□ -0.28
CKS1BP61024 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CKS1BP61024 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 AC093484.2-201ENST00000580996 2166 ntBASIC13.27□□□□□ -0.28
CKS1BP61024 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.27□□□□□ -0.28
CKS1BP61024 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CKS1BP61024 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CKS1BP61024 AC123595.1-201ENST00000440769 1046 ntBASIC13.27□□□□□ -0.29
CKS1BP61024 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
CKS1BP61024 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CKS1BP61024 KRT16P6-202ENST00000425692 1426 ntBASIC13.27□□□□□ -0.29
CKS1BP61024 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.27□□□□□ -0.29
CKS1BP61024 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.27□□□□□ -0.29
CKS1BP61024 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
CKS1BP61024 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.27□□□□□ -0.29
CKS1BP61024 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.27□□□□□ -0.29
CKS1BP61024 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.27□□□□□ -0.29
CKS1BP61024 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CKS1BP61024 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CKS1BP61024 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CKS1BP61024 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CKS1BP61024 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.26□□□□□ -0.29
CKS1BP61024 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CKS1BP61024 KRT19P1-201ENST00000405746 1186 ntBASIC13.26□□□□□ -0.29
CKS1BP61024 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.26□□□□□ -0.29
CKS1BP61024 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.26□□□□□ -0.29
CKS1BP61024 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.26□□□□□ -0.29
CKS1BP61024 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.26□□□□□ -0.29
CKS1BP61024 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CKS1BP61024 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CKS1BP61024 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 AC087633.2-202ENST00000565166 1439 ntBASIC13.26□□□□□ -0.29
CKS1BP61024 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.26□□□□□ -0.29
CKS1BP61024 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.26□□□□□ -0.29
CKS1BP61024 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.26□□□□□ -0.29
CKS1BP61024 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 FLJ16779-201ENST00000612722 7638 ntBASIC13.26□□□□□ -0.29
CKS1BP61024 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CKS1BP61024 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms