Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 AP000974.1-201ENST00000623909 2387 ntBASIC16.97■□□□□ 0.31
CLDN17P56750 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN17P56750 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 KRT8P11-201ENST00000409686 1436 ntBASIC16.97■□□□□ 0.31
CLDN17P56750 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLDN17P56750 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLDN17P56750 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLDN17P56750 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN17P56750 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.97■□□□□ 0.31
CLDN17P56750 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN17P56750 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN17P56750 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN17P56750 AC018445.3-201ENST00000624177 1945 ntBASIC16.97■□□□□ 0.31
CLDN17P56750 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLDN17P56750 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN17P56750 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN17P56750 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN17P56750 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLDN17P56750 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN17P56750 MESTP1-201ENST00000404287 994 ntBASIC16.96■□□□□ 0.31
CLDN17P56750 SNORA78-201ENST00000459373 127 ntBASIC16.96■□□□□ 0.31
CLDN17P56750 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN17P56750 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN17P56750 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLDN17P56750 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN17P56750 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN17P56750 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLDN17P56750 AC020763.4-201ENST00000623414 4170 ntBASIC16.96■□□□□ 0.31
CLDN17P56750 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
CLDN17P56750 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN17P56750 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN17P56750 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN17P56750 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN17P56750 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN17P56750 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN17P56750 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CLDN17P56750 AC116562.2-201ENST00000507042 360 ntBASIC16.95■□□□□ 0.3
CLDN17P56750 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.95■□□□□ 0.3
CLDN17P56750 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
CLDN17P56750 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 AP003071.4-201ENST00000562276 1284 ntBASIC16.95■□□□□ 0.3
CLDN17P56750 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN17P56750 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
CLDN17P56750 REXO1L10P-201ENST00000615707 1290 ntBASIC16.95■□□□□ 0.3
CLDN17P56750 REXO1L12P-201ENST00000622156 912 ntBASIC16.95■□□□□ 0.3
CLDN17P56750 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CLDN17P56750 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN17P56750 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN17P56750 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CLDN17P56750 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN17P56750 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN17P56750 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CLDN17P56750 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN17P56750 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN17P56750 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN17P56750 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN17P56750 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN17P56750 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms