Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH13P55290 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH13P55290 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH13P55290 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH13P55290 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 RNA5SP413-201ENST00000516373 109 ntBASIC18.6■□□□□ 0.57
CDH13P55290 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CDH13P55290 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDH13P55290 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH13P55290 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CDH13P55290 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 AC005082.1-201ENST00000413042 2259 ntBASIC18.6■□□□□ 0.57
CDH13P55290 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH13P55290 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.59■□□□□ 0.57
CDH13P55290 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH13P55290 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH13P55290 AC233263.1-201ENST00000578059 224 ntBASIC18.59■□□□□ 0.57
CDH13P55290 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.59■□□□□ 0.57
CDH13P55290 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH13P55290 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDH13P55290 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH13P55290 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH13P55290 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CDH13P55290 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.58■□□□□ 0.57
CDH13P55290 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH13P55290 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH13P55290 AC138932.1-201ENST00000534164 6830 ntBASIC18.58■□□□□ 0.57
CDH13P55290 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CDH13P55290 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH13P55290 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH13P55290 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.58■□□□□ 0.57
CDH13P55290 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.58■□□□□ 0.57
CDH13P55290 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH13P55290 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CDH13P55290 AL160286.2-201ENST00000567150 934 ntBASIC18.58■□□□□ 0.56
CDH13P55290 C1QL1P1-201ENST00000568105 661 ntBASIC18.58■□□□□ 0.56
CDH13P55290 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH13P55290 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH13P55290 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH13P55290 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CDH13P55290 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH13P55290 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDH13P55290 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH13P55290 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 AP003097.1-201ENST00000530657 1135 ntBASIC18.57■□□□□ 0.56
CDH13P55290 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH13P55290 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH13P55290 MTDHP1-201ENST00000605323 784 ntBASIC18.57■□□□□ 0.56
CDH13P55290 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH13P55290 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDH13P55290 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms