Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PDE1AP54750 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.23■■□□□ 1.31
PDE1AP54750 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PDE1AP54750 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PDE1AP54750 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.22■■□□□ 1.31
PDE1AP54750 AP001412.1-201ENST00000608405 714 ntBASIC23.22■■□□□ 1.31
PDE1AP54750 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.22■■□□□ 1.31
PDE1AP54750 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.22■■□□□ 1.31
PDE1AP54750 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PDE1AP54750 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDE1AP54750 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
PDE1AP54750 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PDE1AP54750 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE1AP54750 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.21■■□□□ 1.31
PDE1AP54750 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.21■■□□□ 1.31
PDE1AP54750 REXO1L10P-201ENST00000615707 1290 ntBASIC23.21■■□□□ 1.31
PDE1AP54750 REXO1L12P-201ENST00000622156 912 ntBASIC23.21■■□□□ 1.31
PDE1AP54750 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE1AP54750 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDE1AP54750 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.21■■□□□ 1.31
PDE1AP54750 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE1AP54750 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.21■■□□□ 1.31
PDE1AP54750 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.2■■□□□ 1.3
PDE1AP54750 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE1AP54750 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
PDE1AP54750 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.2■■□□□ 1.3
PDE1AP54750 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
PDE1AP54750 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.2■■□□□ 1.3
PDE1AP54750 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE1AP54750 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE1AP54750 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PDE1AP54750 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.2■■□□□ 1.3
PDE1AP54750 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.2■■□□□ 1.3
PDE1AP54750 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE1AP54750 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDE1AP54750 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.2■■□□□ 1.3
PDE1AP54750 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE1AP54750 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.19■■□□□ 1.3
PDE1AP54750 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
PDE1AP54750 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 KRT8P3-201ENST00000519669 1449 ntBASIC23.19■■□□□ 1.3
PDE1AP54750 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.19■■□□□ 1.3
PDE1AP54750 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.19■■□□□ 1.3
PDE1AP54750 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.19■■□□□ 1.3
PDE1AP54750 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
PDE1AP54750 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE1AP54750 Z98044.1-201ENST00000632503 1764 ntBASIC23.19■■□□□ 1.3
PDE1AP54750 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE1AP54750 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PDE1AP54750 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE1AP54750 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.19■■□□□ 1.3
PDE1AP54750 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 AC096733.2-201ENST00000609937 1394 ntBASIC23.18■■□□□ 1.3
PDE1AP54750 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.18■■□□□ 1.3
PDE1AP54750 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PDE1AP54750 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.18■■□□□ 1.3
PDE1AP54750 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.18■■□□□ 1.3
PDE1AP54750 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 AC026471.5-201ENST00000615068 467 ntBASIC23.18■■□□□ 1.3
PDE1AP54750 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PDE1AP54750 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PDE1AP54750 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE1AP54750 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms